Matthew Eisen has been honored with over 30 awards, including:

Five EMMY Awards
National Academy of Television Arts and Sciences, Southwest Region (Writer, Documentary, Historical/Biographical Program, Discussion/Interview Program, Public Service Announcement)

First Place
Network Television Movie - Scott Newman Drug Abuse Prevention Awards

Two CINE Golden Eagles
Council on International Non-Theatrical Events

Gold Award, Silver Award
Corporation for Public Broadcasting Program Awards (Public Affairs, Community Service)

Two Golden Mikes
Radio & Television News Association of Southern California (Best Documentary, Best Special News Program)

First Place
Television News - The International Health and Medical Film Festival

First Place
Major Market Television - California Medical Association Awards for Excellence in Health Care Reporting

Red Ribbon
American Film and Video Festival

Two First Place and one Special Recognition
National Conference of Christians and Jews Media Awards (Best Documentary, Best Television Series, Best Television Special)

Two First Place Awards
San Diego County Medical Society (Best Television Documentary, Best Television Special)

Best of Show
Television - San Diego Press Club Awards